Search results

Running testNhoods with and without "model.contrasts" argument results in wildly different results

Status: Open.

#376 In MarioniLab/miloR;

· jcshuy opened on Oct 24, 2025

Error in crossprod(x, y) : requires numeric/complex matrix/vector arguments

Status: Open.

#375 In MarioniLab/miloR;

· boluofen opened on Oct 17, 2025

BayesianOptimization for parameter selection

Status: Open.

#374 In MarioniLab/miloR;

· SeZuNo opened on Sep 16, 2025

testnhoods with interaction effect

Status: Open.

#371 In MarioniLab/miloR;

· michaelhojungyoon opened on Aug 9, 2025

Neighborhood Graph Construction shared or not

Status: Open.

#370 In MarioniLab/miloR;

· RunyuXia opened on Aug 5, 2025

there were an error in testNhoods()

Status: Open.

#364 In MarioniLab/miloR;

· herong2006 opened on Apr 3, 2025

label hoods in NhoodGraphDA

Status: Open.

#363 In MarioniLab/miloR;

· Luuk024026 opened on Mar 28, 2025

Predefined Graph Import Still Not Available to Use

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#318 In MarioniLab/miloR;

· DarioS opened on Apr 10, 2024

How to implement more complex contrast formulas

Status: Open.

#305 In MarioniLab/miloR;

· CarlottaHS opened on Feb 2, 2024

merging Nhood with logFC of opposite sign

bugSomething isn't workingSomething isn't working

Status: Open.

#270 In MarioniLab/miloR;

· gianfilippo opened on Mar 3, 2023

Overlay DA neighborhoods on embedding

Status: Open.

#251 In MarioniLab/miloR;

· mdmanurung opened on Nov 16, 2022

Annotating nhoods by continuous covariates

Status: Open.

#218 In MarioniLab/miloR;

· emdann opened on May 10, 2022