Multivariate Repeated Measurements with adonis():

Please check the updated code in the comment by Wallace Beiroz, 26 January 2015 at 13:37!

Lately I had to figure out how to do a repeated measures (or mixed effects) analysis on multivariate (species) data. Here I share code for a computation in R with the adonis function of the vegan package. Credit goes to Gavin Simpson providing most of the important pieces of the below code in R-Help.